فهرست مطالب

Contents

Bioinformatics

Introduction to Bioinformatics . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 3

Review About Bioinformatics, Databases, Sequence Alignment,

Docking, and Drug Discovery . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 11

Machine Learning for Bioinformatics. . . . . . . . . . . . . . . . . . . . . . . . . . . 25

Impact of Machine Learning in Bioinformatics Research. . . . . . . . . . . . 41

Text Mining in Bioinformatics . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 63

Open-Source Software Tools for Bioinformatics . . . . . . . . . . . . . . . . . . . 75

Protein Structure Prediction and Gene Expression Analysis

A Study on Protein Structure Prediction . . . . . . . . . . . . . . . . . . . . . . . . 95

Computational Methods Used in Prediction of Protein Structure . . . . . . 119

Computational Methods for Inference of Gene Regulatory Networks

from Gene Expression Data . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 135

Machine-Learning Algorithms for Feature Selection from Gene

Expression Data . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 151

ixGenomics and Proteomics

Unsupervised Techniques in Genomics . . . . . . . . . . . . . . . . . . . . . . . . . . 165

Supervised Techniques in Proteomics . . . . . . . . . . . . . . . . . . . . . . . . . . . 189

Visualizing Codon Usage Within and Across Genomes:

Concepts and Tools . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 213

Single-Cell Multiomics: Dissecting Cancer . . . . . . . . . . . . . . . . . . . . . . . 289

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