فهرست مطالب:

Contents
Identification of Antimicrobial Peptides from Macroalgae
with Machine Learning . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 1
A Health-Related Study from Food Online Reviews. The Case
of Gluten-Free Foods . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 12
The Activity of Bioinformatics Developers and Users
in Stack Overflow . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 23
ProPythia: A Python Automated Platform for the Classification
of Proteins Using Machine Learning . . . . . . . . . . . . . . . . . . . . . . . . . . . 32
Inferences on Mycobacterium Leprae Host Immune Response
Escape and Antibiotic Resistance Using Genomic Data
and GenomeFastScreen . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 42
Compi Hub: A Public Repository for Sharing and Discovering
Compi Pipelines . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 51
DeepACPpred: A Novel Hybrid CNN-RNN Architecture
for Predicting Anti-Cancer Peptides . . . . . . . . . . . . . . . . . . . . . . . . . . . . 60
Preventing Cardiovascular Disease Development Establishing Cardiac

Well-Being Indexes . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 70

Fuzzy Matching for Cellular Signaling Networks in a Choroidal
Melanoma Model . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 80

Towards A More Effective Bidirectional LSTM-Based
Learning Model for Human-Bacterium Protein-Protein Interactions

 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 91

Machine Learning for Depression Screening
in Online Communities . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 102
Towards Triclustering-Based Classification of Three-Way Clinical
Data: A Case Study on Predicting Non-invasive Ventilation in ALS . . . 112
Searching RNA Substructures with Arbitrary Pseudoknots . . . . . . . . . . 123
An Application of Ontological Engineering for Design
and Specification of Ontocancro . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 134
Evaluation of the Effect of Cell Parameters on the Number
of Microtubule Merotelic Attachments in Metaphase Using
a Three-Dimensional Computer Model. . . . . . . . . . . . . . . . . . . . . . . . . . 144
Reconciliation of Regulatory Data: The Regulatory Networks
of Escherichia coli and Bacillus subtilis . . . . . . . . . . . . . . . . . . . . . . . . . 155
A Hybrid of Bat Algorithm and Minimization of Metabolic
Adjustment for Succinate and Lactate Production . . . . . . . . . . . . . . . . . 166
Robustness of Pathway Enrichment Analysis
to Transcriptome-Wide Gene Expression Platform . . . . . . . . . . . . . . . . 176
Hypoglycemia Prevention Using an Embedded Model Control
with a Safety Scheme: In-silico Test . . . . . . . . . . . . . . . . . . . . . . . . . . . . 186
Bidirectional-Pass Algorithm for Interictal Event Detection . . . . . . . . . . 197
Towards the Reconstruction of the Genome-Scale Metabolic Model
of Lactobacillus acidophilus La-14 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 205
Author Index. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 215

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